Establishes haplotype phase for family data. Input is UNIFORMAT file with a modified identifier. There are no limits on the number of families included in each file.
Valid UNIFORMAT files are expected (e.g. loci are
tab separated), putative homozygous are indicated by a single
allele, real homozygous by
allele,allele and unknown typings should be marked as
The identifiers should start with a few additional information related with the family separated by
:, that is, the family name, a number identifier in the family, the position in the family and the number identifiers of the parents (or zero if unknown), like in
Fxxx1:1:child:2:3:regular_id. Both parents must be included in the file even if their typing is not complete.
The filenames are expected to end on .unif